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Rare & inherited disease

Rare disease genomic tests cover testing for a wide range of clinical indications relevant to various specialisms. All testing is aligned to the national genomic test directory, which is updated regularly. Please always check for updates before ordering tests.

If you already know which test you require, the quick links below can help. Otherwise read on for more information.

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What is genomic testing for rare diseases?

Rare and inherited disease genetic and genomic testing is available for a wide range of conditions including inherited cancers. The tests that are available, eligibility criteria and specialisms that are approved to refer for each test are detailed in the eligibility criteria document provided with the national genomic test directory (opens in a new tab).

The directory also includes several pharmacogenomic tests to assess the suitability of patients for specific treatments. Find out about pharmacogenomic tests.

How to order testing

Click below for a rapid checklist for test ordering, or scroll down for more details

Test ordering checklist
  • Check the national genomic test directory (opens in a new tab)
    • Is your patient eligible?
    • Are you able to refer for the test?
    • Do you know the test method?
  • Check PanelApp (opens in a new tab) to see what genes are tested
  • Obtain informed consent from the patient
    • Document this with the record of discussion form
  • Completed the appropriate order form for the relevant test method
    Note: (we recommend providing a pool email address for the return of results)
    • Rare disease test order form - Non-WGS
    • WGS test order form
      • Sample details may be included in the WGS form, or provided using a separate test order form (non-WGS).
      • For WGS requests, the Record of Discussion form should also be sent to the lab.
  • Collect and send samples:

1. Find the test

Please consult the national genomic test directory eligibility criteria document carefully when referring patients.

  • Make a note of the clinical indication for the test you require and whether the Test Method is whole genome sequencing (WGS).
  • Ensure that your patient meets the eligibility criteria and that your specialism is able to refer for that test.

For additional help finding the right test for a specific clinical indication visit the NHS Genomic Medicine Service panels resource.

Specific information about prenatal testing is available on our prenatal testing page.

Non-urgent advice: Rare disease tests with separate referral processes

There are several rare disease tests that have their own referral processes. These are:

  • R14 for acutely unwell children
  • R454 for treating symptomatic obstructive hypertrophic cardiomyopathy with mavacamten

Visit our external referral tests page for information on how to request these tests.

2. Patient information and consent

You must discuss genomic testing with your patient before referring for testing and there needs to be a record of the discussion retained in the patient record. The discussion must include possible implications for the patient and their family members.

Record of discussion forms are provided alongside our order forms. Forms are different for whole genome sequencing (WGS) and non-WGS tests.

Record of discussion forms for WGS tests must be sent to East Genomics along with the test request form.

Find out more about discussing testing with patients and available training to support you.

3. Order forms

Our rare disease order form can be used to request most tests and, where samples are required, should be sent to the lab along with the sample. For whole genome sequencing tests, additional NHS forms must be completed.

Please ensure forms are fully and legibly completed with full clinical details and contact information for us to return results.

Referring for multiple tests

If a patient is eligible for whole genome sequencing in addition to other non-WGS test, it may be possible for all tests to be processed together as part of whole genome sequencing. These extra tests can be requested using the Additional Panels section of the WGS order form.

To check whether a test can be added to WGS, go to the PanelApp website (opens in a new tab) and search for a condition. If the panel includes “GMS Rare Disease Virtual” as a Panel Type, then this test can be requested as an additional panel via WGS.

Virtual panels are indicated in panel app as GMS Rare Disease Virtual in the Panel Types section.

Additional guidance on using Panel App

Where a patient is eligible for multiple tests, we encourage you to carefully consider which tests are most appropriate. Please contact the lab for guidance if needed.

For tests where the Test Method is "WGS"

Whole genome sequencing tests will be identified by ‘WGS’ in the test method section of the national genomic test directory (opens in a new tab). An initial request for testing must be made using NHS forms for ordering and records of discussion. To request these tests you must:

To ensure rapid processing and return of results please ensure forms are complete and legible.

For additional guidance consult our step-by-step guide.

For tests where the Test Method is not "WGS"

Non-WGS tests cover all other Test Methods. This includes all panels, WES (whole exome sequencing), single gene sequencing, microarrays etc.

Order non-whole genome sequencing

To ensure rapid processing and return of results please ensure forms are complete and legible.

Find out about the criteria under which you can request urgent test processing

4. Collecting and sending samples

Ensure that you consult our sample requirement and transport of samples pages before collecting and sending samples to us.

Visit our contact page to find out where to send your samples.

5. Results

Results are sent via email to the provided email address. We encourage you to use a pool email rather than your individual contact information.

We make every effort to return results and meaningful analysis within target turnaround times. Visit our turnaround times page to see what these targets are and our recent performance statistics.

Which tests can I order?

The tests you can order will vary depending on your specialism. Some of the specialisms covered by the rare disease directory are listed below.

Example list of referring specialisms

This is not a complete list of specialisms. You should always check the directory for specialisms linked to a specific test.

Audiology, Cardiology, Chemical pathology, Clinical genetics, Dermatology, Endocrinology, Gastroenterology, GPs, Gynaecology, Haematology, Hepatology, Histopathology, Immunology, Nephrology, Neurology, Obstetrics, Oncology, Paediatrics, Pathology, Psychiatry, Rheumatology, Surgery, Urology

Which genes do we look for?

The genes analysed vary depending on the tests performed. Whole genome sequencing will look at the whole genome, many of our tests look at specific panels of genes. You can find out about which gene are included in these panels by using the PanelApp (opens in a new tab).

Find out more about using PanelApp