East Genomics

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Expanding access to chromosome analysis and improving reporting

The updated national genomic test directory includes replacement of the clinical indication “Possible structural chromosomal rearrangement - karyotype or Targeted Chromosomal Analysis” (R297) with six new tests.

The below outlines the changes and what they mean for test ordering. To stay up to date with changes to the national genomic test directory, please sign up here.

By making the reasons for testing clearer and including new requesting specialisms, this change aims to ensure tests are available to more patients and provide more clinically relevant results.

Replacing possible structural chromosomal rearrangement (R297)

Following the NGTD update, please use the new codes to order testing. Full eligibility criteria for each test are included in the national genomic test directory (opens in a new tab). The new tests are:

  • Relevant for patient (proband testing):
    • R463 Cytogenetic characterisation of a genomic abnormality
    • R465 Familial cytogenetic rearrangement
    • R468 Possible sex chromosome aneuploidy or structural rearrangement
  • Relevant to fertility:
    • R464 Recurrent miscarriage, products of conception are not available
    • R466 Unexplained infertility*
    • R467 Gamete donors

*Requests related to premature ovarian insufficiency should use the R402 clinical indication code instead, which includes Karyotyping and FMR1 testing.

All of the new tests will make use of the same methodology (karyotyping/targeted chromosomal analysis) as R297 and will provide comparable results presented in a familiar format.

In the short term, where sufficient clinical information is provided, we will automatically reassign orders for R297 to the most appropriate of the new clinical indications. Where this is not possible, we will contact you for guidance.

Please consult the national genomic test directory and eligibility criteria before ordering and include on the order form details of how your patient meets the eligibility criteria for testing.

Additional requesting specialties

The new test codes cover a wider range of requesting specialties. This will help to ensure appropriate testing is available for eligible patients. Requesting a specific test and providing detailed clinical information guides our analysis and reporting, helping us to provide more meaningful interpretation of results.

Requesting specialties for new tests as listed in the NGTD
R314 R463 R464 R465 R466 R467 R468
Clinical genetics R314 X R463 X R464 X R465 X R466 X R467 R468 X
Fetal medicine R314 R463 X R464 X R465 X R466 R467 R468
Endocrinology R314 X R463 X R464 R465 X R466 X R467 R468 X
Neonatology R314 X R463 R464 R465 R466 R467 R468
Paediatrics* R314 R463 X R464 R465 X R466 R467 R468 X
Pathology* R314 R463 R464 X R465 R466 R467 R468
Gynaecology* R314 R463 R464 X R465 R466 X R467 R468
Reproductive medicine* R314 R463 R464 R465 R466 X R467 R468
Fertility centres* R314 R463 R464 R465 R466 R467 X R468

* specialties not previously able to order R297

These changes are part of a wider update to the national genomic test directory.

If you have any questions, please contact us.